Publications

With our collaborators, we regularly publish in peer-reviewed journals—sharing methods and data to expand the evidence base for innovation. Below is a list of select publications on behalf of our team and partners.

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March 13, 2024
OXFORD Academic

Determinants of CRISPR Cas12a nuclease activation by DNA and RNA targets

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2024-03-13
June 18, 2023
CVPR-DL-UIA

Deep learning video classification of lung ultrasound features associated with pneumonia

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2023-06-18
March 6, 2023
Society of Photo-Optical Instrumentation Engineers

Evaluating color correction algorithms for automated interpretation of urinalysis dipsticks with low-cost image sensors

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2023-03-06
October 10, 2022
Scientific Reports

Metagenomic DNA sequencing to quantify Mycobacterium tuberculosis DNA and diagnose tuberculosis

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2022-10-10
September 23, 2022
Science Direct

Retrofitting stoves with forced jets of primary air improves speed, emissions, and efficiency: Evidence from six types of biomass cookstoves

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2022-09-23
July 21, 2022
Nature Communications

A metagenomic DNA sequencing assay that is robust against environmental DNA contamination

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2022-07-21
June 22, 2022
Scientific Reports

Estimating female malaria mosquito age by quantifying Y-linked genes in stored male spermatozoa

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2022-06-22
May 11, 2022
Scientific Reports

Rapid, sensitive, and low‑cost detection of Escherichia coli bacteria in contaminated water samples using a phage‑based assay

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2022-05-11
April 25, 2022
Malaria Journal

Field evaluation of the diagnostic performance of EasyScan GO: a digital malaria microscopy device based on machine-learning

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2022-04-25
January 1, 2022
The Royal Society of Chemistry

A microfluidic device and instrument prototypes for the detection of Escherichia coli in water samples using a phage-based bioluminescence assay

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2022-01-01
October 26, 2021
Clinical Chemistry

Measurement Biases Distort Cell-Free DNA Fragmentation Profiles and Define the Sensitivity of Metagenomic Cell-Free DNA Sequencing Assays

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2021-10-26
August 17, 2021
iScience

Kinetic analysis of Cas12a and Cas13a RNA-Guided nucleases for development of improved CRISPR-Based diagnostics

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2021-08-17
May 17, 2021
Plos One

Characterization of oral swab samples for diagnosis of pulmonary tuberculosis

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2021-05-17
March 5, 2021
BMC Pulmonary Medicine

A feasibility study evaluating a reservoir storage system for continuous oxygen delivery for children with hypoxemia in Kenya

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2021-03-05
March 5, 2021
Society of Photo-Optical Instrumentation Engineers

Effects of image capture and correction approaches on quantifying results of lateral flow assays with mobile phones

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2021-03-05
February 25, 2021
Malaria Journal

Performance of a fully‐automated system on a WHO malaria microscopy evaluation slide set

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2021-02-25
February 25, 2021
Analytical Chemistry

Multiplexed and extraction-free amplification for simplified SARS-CoV-2 RT-PCR tests.

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2021-02-25
December 8, 2020
ChemRxiv

A SARS-CoV-2 Coronavirus nucleocapsid protein antigen-detecting lateral flow assay

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2020-12-08
December 1, 2020
Veterinary Parasitology

An alternative cold chain for storing and transporting East Coast fever vaccine

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2020-12-01
October 29, 2020
Institute of Electrical and Electronics Engineers

Algorithms to predict moisture content of grain using relative humidity time-series

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2020-10-29
October 14, 2020
Infectious Agents and Cancer

Design and feasibility of a novel program of cervical screening in Nigeria: Self-sampled HPV testing paired with visual triage

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2020-10-14
September 9, 2020
Scientific Reports

Optical tracking and laser-induced mortality of insects during flight

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2020-09-09
August 31, 2020
BMC Pulmonary Medicine

Efficacy and safety of oxygen-sparing nasal reservoir cannula for treatment of pediatric hypoxemic pneumonia in Uganda: a pilot randomized clinical trial

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2020-08-31
July 24, 2020

Antibody screening results for anti-nucleocapsid antibodies towards the development of a SARS-CoV-2 nucleocapsid protein antigen detecting lateral flow assay

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2020-07-24
July 20, 2020
Institute of Electrical and Electronics Engineers

Deep learning-based image evaluation for cervical precancer screening with a smartphone targeting low resource settings – engineering approach

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2020-07-20
July 1, 2020
Analytical Chemistry

SARS-CoV-2 Coronavirus nucleocapsid antigen-detecting half-strip lateral flow assay toward the development of point of care tests using commercially available reagents

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2020-07-01
June 22, 2020
OSA Technical Digest

Potential for predicting soil properties using low cost near-infrared spectroscopy and machine learning

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2020-06-22
March 12, 2020
Institute of Electrical and Electronics Engineers

Mining spectral libraries with machine learning for soil sensing in low resource settings

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2020-03-12
February 10, 2020
Pediatric Pulmonology

Oxygen insecurity and mortality in resource‐constrained healthcare facilities in rural Kenya

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2020-02-10
February 3, 2020
Translational Animal Science

Using on-demand dry ice production as an alternative cryogenic cold chain for bovine artificial insemination outreach in low-resource settings

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2020-02-03
January 30, 2020
Analytical Chemistry

Wash-free, digital immunoassay in polydisperse droplets

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2020-01-30
January 9, 2020
ChemRxiv

Screening antibodies raised against the spike glycoprotein of SARS-CoV-2 to support the development of rapid antigen assays

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2020-01-09
November 4, 2019
Applied Spectroscopy

Evaluating low-cost optical spectrometers for the detection of simulated substandard and falsified medicines

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2019-11-04
October 31, 2019
The Lancet

Lipoarabinomannan point-of-care tests: evaluation with fresh samples needed

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2019-10-31
October 23, 2019
Journal of Clinical Microbiology

Investigation of preanalytical variables impacting pathogen cell-free DNA in blood and urine

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2019-10-23
October 17, 2019
Institute of Electrical and Electronics Engineers

Development of a simplified reader for digital droplet assays performed in limited resource settings

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2019-10-17
October 17, 2019
Institute of Electrical and Electronics Engineers

Integrated robotic system for the development lateral flow assays

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2019-10-17
October 17, 2019
INSTITUTE OF ELECTRICAL AND ELECTRONICS ENGINEERS

Fully-automated patient-level malaria assessment on field-prepared thin blood film microscopy images

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2019-10-17
June 28, 2019
Lab on a Chip

Sensitivity enhancement in lateral flow assays: a systems perspective

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2019-06-28
March 26, 2019
PLoS ONE

Ultrasensitive detection of lipoarabinomannan with plasmonic grating biosensors in clinical samples of HIV negative patients with tuberculosis

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2019-03-26
March 4, 2019
Society of Photo-Optical Instrumentation Engineers

Development of a low cost SWIR spectrometer for low resource settings (conference presentation)

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2019-03-04
February 6, 2019
PLoS ONE

Assessment of a storage system to deliver uninterrupted therapeutic oxygen during power outages in resource-limited settings

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2019-02-06
January 22, 2019
Journal of Medical Devices

A robust incubator to improve access to microbiological culture in low resource environments

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2019-01-22
January 10, 2019
Journal of the National Cancer Institute

An observational study of deep learning and automated evaluation of cervical images for cancer screening

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2019-01-10
December 6, 2018
African Journal of Laboratory Medicine

Need for better adherence to optimal incubation temperature for quality laboratory diagnostics and antibiotic resistance monitoring

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2018-12-06
September 25, 2018
Malaria Journal

Automated microscopy for routine malaria diagnosis: a field comparison on Giemsa-stained blood films in Peru

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2018-09-25
August 7, 2018
Analytical Chemistry

Simple polydisperse droplet emulsion polymerase chain reaction with statistical volumetric correction compared with microfluidic droplet digital polymerase chain reaction

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2018-08-07
May 18, 2018
The Journal of Infectious Diseases

Rapid establishment of a cold chain capacity of –60°C or colder for the STRIVE Ebola vaccine trial during the Ebola outbreak in Sierra Leone

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2018-05-18
April 23, 2018
Analytical Chemistry

Threshold-based quantification in a multiline lateral flow assay via computationally designed capture efficiency

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2018-04-23
April 3, 2018
Biophotonics Congress

The challenges and prospects of microscopy and biophotonics in low resource settings

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2018-04-03
March 29, 2018
Annual Review of Analytical Chemistry

Improving lateral flow assay performance using computational modeling

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2018-03-29
February 13, 2018
Society of Photo-Optical Instrumentation Engineers

Characterization of cervigram image sharpness using multiple self-referenced measurements and random forest classifiers

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2018-02-13
February 13, 2018
Society of Photo-Optical Instrumentation Engineers

Detecting adulterants in milk with lower cost mid-infrared and Raman spectroscopy

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2018-02-13
December 29, 2017
PLOS Neglected Tropical Diseases

A highly stable blood meal alternative for rearing Aedes and Anopheles mosquitoes.

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2017-12-29
December 19, 2017
Food and Nutrition Bulletin

First field test of an innovative, wider tape to measure mid-upper arm circumference in young Laotian children

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2017-12-19
December 9, 2017
Expert Review of Molecular Diagnostics

Selecting analytical biomarkers for diagnostic applications: a first principles approach

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2017-12-09
October 22, 2017
Institute of Electrical and Electronics Engineers

Computer-automated Malaria diagnosis and quantitation using Convolutional Neural Networks

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2017-10-22
June 2, 2017
Biomicrofluidics

Rapid concentration and elution of malarial antigen histidine-rich protein II using solid phase Zn(II) resin in a simple flow-through pipette tip format

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2017-06-02
May 3, 2017
The American Journal of Tropical Medicine and Hygiene

A new handheld device for the detection of falsified medicines: demonstration on falsified artemisinin-based therapies from the field

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2017-05-03
October 13, 2016
Institute of Electrical and Electronics Engineers

A SDD and PCM solution for vaccine storage and outreach

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2016-10-13
June 17, 2016
Scientific Reports

Maintaining semen quality by improving cold chain equipment used in cattle artificial insemination

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2016-06-17
June 13, 2016
Journal of Translational Engineering in Health and Medicine

More than just accuracy: A novel method to incorporate multiple test attributes in evaluating diagnostic tests including point of care tests

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2016-06-13
June 1, 2016
Point of Care

The next phase for point-of-care testing in resource-limited settings noncommunicable disease

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2016-06-01
February 18, 2016
Scientific Reports

Laser induced mortality of Anopheles stephensi mosquitoes

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2016-02-18
October 8, 2015
Institute of Electrical and Electronics Engineers

Challenging requirements in resource challenged environment on a time challenged schedule: A technical solution to support the cold chain for the VSV-Zebov (Merck) Ebola vaccine in Sierra Leone Guinea

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2015-10-08
October 8, 2015
Institute of Electrical and Electronics Engineers

Automated microscopy and machine learning for expert-level malaria field diagnosis

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2015-10-08
April 17, 2014
Malaria Journal

Limitations of haemozoin-based diagnosis of Plasmodium falciparum using dark-field microscopy

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2014-04-17
April 15, 2014
Lab on a Chip

A paper microfluidic cartridge for automated staining of malaria parasites with an optically transparent microscopy window

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2014-04-15
August 20, 2013
Biomedical Optics Express

Automated bacterial identification by angle resolved dark-field imaging

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2013-08-20
June 8, 2011
Optics Express

Detection of malarial byproduct hemozoin utilizing its unique scattering properties

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2011-06-08
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